circRNA basic information
circBase ID: hsa_circ_0001658
Name: -
Synonym: circRNA_0001658 / circ_0001658
Host Gene: -
Genomic location(hg19): chr6:157357968-157406039:+
Genomic location(hg38): chr6:157036834-157084905:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissue; normal tissue; paracancerous tissues; adjacent non-neoplastic tissues

Cell lines:

HT29; SW480; LoVo; DLD-1; FHC

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: METTL3
Associated microRNA: miR-590-5p
Biological function: promotes proliferation, inhibits apoptosis, and accelerates cell cycle progression of colorectal cancer cells
Molecular mechanism: ceRNA mechanism: circ_0001658 sponges miR-590-5p to upregulate METTL3
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; CCK8; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; Clinical Sample Validation

Clinical significance:

-

Description:

In colorectal cancer, circ_0001658 is up-regulated in tissues and CRC cell lines and acts as an oncogenic circRNA. It mainly localizes to the cytoplasm and promotes proliferation and cell-cycle progression while inhibiting apoptosis by sponging miR-590-5p to increase METTL3 expression.

Confidence score:

0.7519

Other information
Title:

Hsa_circ_0001658 accelerates the progression of colorectal cancer through miR-590-5p/METTL3 regulatory axis.

Journal: World journal of gastrointestinal oncology
Published: 2023
PubMed ID: 36684043
Study type:

combined biological and clinical study

Data availability: GSE172229
Code availability: -