circRNA basic information
circBase ID: hsa_circ_0000826
Name: hsa_circ_ANKRD12
Synonym: Circ_0000826
Host Gene: ANKRD12
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent healthy tissues; cancerous tissue samples; healthy tissue samples; adenocarcinoma tissues

Cell lines:

NCM460; SW620; HCT116; HCT8; LoVo; Caco2; SW480; RKO; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: AU-rich element RNA-binding protein 1 (AUF1), heterogeneous nuclear ribonucleoprotein D (hnRNP D), c-MYC 3 0 -UTR, c-MYC
Associated microRNA: -
Biological function: Circ_0000826 inhibits CRC cell proliferation in vitro and in vivo; silencing Circ_0000826 promotes CRC cell proliferation, whereas overexpression restricts proliferation.
Molecular mechanism: Circ_0000826 binds AUF1 and competitively inhibits AUF1 binding to the c-MYC 3 0 -UTR, thereby reducing c-MYC expression and CRC cell proliferation.
Biological pathway or process:

proliferation (inhibits); other pathway/process (inhibits)

Detected method:
Q
H
S
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; FISH / smFISH; ISH (In Situ Hybridization); Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Circ_0000826 is significantly down-regulated in CRC tissues, associated with poor prognosis, and shows diagnostic potential with an AUC value of 0.823.

Description:

Circ_0000826 is down-regulated in colorectal cancer tissues and low expression is associated with worse patient prognosis. Functionally, Circ_0000826 suppresses CRC cell proliferation in vitro and in a xenograft model. Mechanistically, it binds the RNA-binding protein AUF1 and competes with the c-MYC mRNA 3 0 -UTR for AUF1 binding, thereby reducing c-MYC protein expression and tumor proliferation.

Confidence score:

0.8939

Other information
Title:

Hsa_Circ_0000826 inhibits the proliferation of colorectal cancer by targeting AUF1.

Journal: Journal of genetics and genomics = Yi chuan xue bao
Published: 2023
PubMed ID: 35940521
Study type:

combined biological and clinical study

Data availability: Supplementary data to this article can be found online at https:// doi.org/10.1016/j.jgg.2022.07.006.
Code availability: -