circRNA basic information
circBase ID: hsa_circ_0110389
Name: hsa_circ_SORT1
Synonym: -
Host Gene: SORT1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; adjacent normal tissues; xenograft tumors

Cell lines:

GES-1; HGC-27; MKN-45; AGS; SUN-1; NCI-N87; KATO III

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SORT1, Beclin-1, LC3B, p62
Associated microRNA: miR-127-5p, miR-136-5p
Biological function: promotes proliferation, migration, and invasion of gastric cancer cells; promotes tumor growth in vivo; promotes autophagy
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-127-5p and miR-136-5p to upregulate SORT1 (primarily at protein/translation level), thereby promoting gastric cancer progression and autophagy.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); autophagy (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); IF (Immunofluorescence); Western Blot; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High hsa_circ_0110389 expression associates with advanced stages of GC and predicts poor prognosis; independent prognostic factor for OS and DFS.

Description:

hsa_circ_0110389 is up-regulated in gastric cancer tissues/cells and is mainly cytoplasmic. It promotes GC proliferation, migration, invasion and xenograft growth by sponging miR-127-5p and miR-136-5p, thereby increasing SORT1 expression and influencing autophagy-related proteins.

Confidence score:

0.8847

Other information
Title:

Circular RNA hsa_circ_0110389 promotes gastric cancer progression through upregulating SORT1 via sponging miR-127-5p and miR-136-5p.

Journal: Cell death & disease
Published: 2021
PubMed ID: 34162830
Study type:

combined biological and clinical study

Data availability: The datasets for the current study are available from the corresponding author on reasonable request.
Code availability: -