circRNA basic information
circBase ID: hsa_circ_0001666
Name: hsa_circ_FAM120B
Synonym: circFAM120B
Host Gene: FAM120B
Genomic location(hg19): chr6:170626457-170639638:+
Genomic location(hg38): chr6:170317369-170330550:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissue; adjacent normal-appearing tissue; plasma

Cell lines:

KYSE-150; TE-1; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PPM1L, PKR
Associated microRNA: miR-661
Biological function: inhibits proliferation; inhibits migration; inhibits invasion; inhibits metastasis; represses EMT
Molecular mechanism: ceRNA sponging of miR-661 to restore PPM1L expression; binds PKR and promotes ubiquitin/proteasome-dependent degradation of PKR, regulating p38 MAPK signaling and EMT
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); EMT (inhibits); MAPK (inhibits); ubiquitination (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; RNA Pull-Down; Western Blot; Co-IP; Transfection; CCK8; Colony Formation Assay; EdU Staining; Transwell Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Clinical Sample Validation; Cohort Study; Survival Analysis

Clinical significance:

circFAM120B was frequently downregulated in cancer tissues and patient plasma, and its expression level was related to overall survival in ESCC patients.

Description:

circFAM120B (hsa_circ_0001666) is down-regulated in ESCC tissues and patient plasma and higher expression indicates better overall survival. It suppresses ESCC proliferation/migration/invasion/metastasis by sponging miR-661 to restore PPM1L expression and by binding PKR to promote its ubiquitin/proteasome-dependent degradation, thereby inhibiting p38 MAPK signaling and EMT.

Confidence score:

0.9018

Other information
Title:

circFAM120B functions as a tumor suppressor in esophageal squamous cell carcinoma via the miR-661/PPM1L axis and the PKR/p38 MAPK/EMT pathway.

Journal: Cell death & disease
Published: 2022
PubMed ID: 35436983
Study type:

combined biological and clinical study

Data availability: GSE131969; GSE53622
Code availability: -