circRNA basic information
circBase ID: hsa_circ_0000567
Name: hsa_circ_SETD3
Synonym: circ_0000567
Host Gene: SETD3
Genomic location(hg19): chr14:99924615-99932150:-
Genomic location(hg38): chr14:99458278-99465813:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; adjacent normal lung tissues; NSCLC tissues; paraffin tumor tissues

Cell lines:

A549; PC9; H1299; BEAS-2B

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: TMEM100, SETD3
Associated microRNA: miR-421
Biological function: Suppresses LUAD cell migration and invasion.
Molecular mechanism: Acts as a miR-421 sponge (ceRNA), relieving miR-421-mediated suppression of TMEM100.
Biological pathway or process:

migration (inhibits); invasion (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Transfection; Luciferase Reporter Assay; Transwell Assay; Wound Healing Assay; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Low circ_0000567 and high miR-421 expression are associated with LUAD; circ_0000567/miR-421/TMEM100 axis is linked to prognosis (OS).

Description:

circ_0000567 is down-regulated in LUAD tissues and cell lines. Functionally, circ_0000567 suppresses LUAD cell migration and invasion by sponging miR-421, thereby relieving miR-421-mediated repression of TMEM100 in a ceRNA network.

Confidence score:

0.704

Other information
Title:

circ_0000567/miR-421/TMEM100 Axis Promotes the Migration and Invasion of Lung Adenocarcinoma and Is Associated with Prognosis.

Journal: Journal of Cancer
Published: 2022
PubMed ID: 35371319
Study type:

combined biological and clinical study

Data availability: TCGA (https://gdc-portal.nci.nih.gov/); GEO: GSE10072; GSE32863; GSE118370
Code availability: -