circRNA basic information
circBase ID: hsa_circ_0047921
Name: hsa_circ_CD226
Synonym: circ_0047921
Host Gene: CD226
Genomic location(hg19): chr18:67562936-67563281:-
Genomic location(hg38): chr18:69895700-69896045:-
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: Non-Small-Cell Lung Cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: let-7g
Biological function: Serves as a serum exosomal diagnostic biomarker for NSCLC and early-stage NSCLC; distinguishes NSCLC cases from healthy controls and COPD controls.
Molecular mechanism: Exosomal circRNA biomarker; potential miRNA-binding mechanism was predicted, but the functional mechanism is unknown.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circ_0047921 showed diagnostic value for distinguishing NSCLC patients from healthy controls, early-stage NSCLC from healthy controls, and NSCLC from COPD controls; the three-circRNA panel showed high diagnostic accuracy.

Description:

circ_0047921 is a down-regulated serum exosomal circRNA in NSCLC. It was validated by qPCR and splice-junction sequencing and showed diagnostic utility for NSCLC, including early-stage disease and discrimination from COPD controls; a predicted miRNA interaction with let-7g was noted.

Confidence score:

0.6556

Other information
Title:

Identification of Three Circular RNA Cargoes in Serum Exosomes as Diagnostic Biomarkers of Non-Small-Cell Lung Cancer in the Chinese Population.

Journal: The Journal of molecular diagnostics : JMD
Published: 2020
PubMed ID: 32535085
Study type:

combined biological and clinical study

Data availability: -
Code availability: -