circRNA basic information
circBase ID: hsa_circ_0027089
Name: hsa_circ_PTGES3
Synonym: circ_0027089
Host Gene: -
Genomic location(hg19): chr12:57059987-57064148:-
Genomic location(hg38): chr12:56666203-56670364:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent normal tissues; plasma samples

Cell lines:

HepG2.2.15; HepAD38 (tet-off); THLE-2; HepG2; HepAD38

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NACC1
Associated microRNA: miR-136-5p
Biological function: Circ_0027089 functioned as an oncogene in HBV-related HCC; it promoted cell proliferation, colony formation, cell cycle progression, migration, invasion and tumor growth, and inhibited apoptosis.
Molecular mechanism: Circ_0027089 acts through a ceRNA mechanism by competitively targeting miR-136-5p to upregulate NACC1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); cell cycle (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Wound Healing Assay; Transwell Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

Circ_0027089 was suggested as a novel biomarker for the treatment of HBV-related HCC; previous evidence regarded it as a promising marker for diagnosis of HBV-associated HCC.

Description:

Circ_0027089 is up-regulated in HBV-related HCC tissues and cell lines and acts as an oncogenic circRNA. It promotes proliferation, cell cycle progression, migration, invasion and xenograft tumor growth while suppressing apoptosis, mainly through the circ_0027089/miR-136-5p/NACC1 ceRNA axis.

Confidence score:

0.7053

Other information
Title:

Circ_0027089 regulates NACC1 by targeting miR-136-5p to aggravate the development of hepatitis B virus-related hepatocellular carcinoma.

Journal: Anti-cancer drugs
Published: 2022
PubMed ID: 34419960
Study type:

combined biological and clinical study

Data availability: Supplemental digital content 1, http://links.lww.com/ACD/A416
Code availability: -