circRNA basic information
circBase ID: hsa_circ_0001361
Name: hsa_circ_FNDC3B
Synonym: circ0001361
Host Gene: FNDC3B
Genomic location(hg19): chr3:171830241-171851336:+
Genomic location(hg38): chr3:172112451-172133546:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer / BCa
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; matched adjacent normal bladder epithelial tissues; adjacent normal bladder mucosa tissues; lung metastatic nodules

Cell lines:

EJ; T24T; UMUC3; 5637; RT4; SV-HUC-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MMP9
Associated microRNA: miR-491-5p
Biological function: circ0001361 promotes bladder cancer cell migration, invasion and metastasis in vitro and in vivo, but has no obvious effect on cell proliferation or cell cycle progression.
Molecular mechanism: circ0001361 acts as a miR-491-5p sponge to upregulate MMP9 expression, thereby promoting bladder cancer cell invasion and metastasis.
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; RNA-seq; FISH / smFISH; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Cell Cycle Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ0001361 expression is positively correlated with pathologic grade, clinical stage, vessel invasion and muscle invasion, and is associated with poor overall survival in bladder cancer patients; it may serve as a potential diagnostic, prognostic or therapeutic target.

Description:

hsa_circ_0001361/circ0001361 is an up-regulated FNDC3B-derived circRNA in bladder cancer. It mainly localizes in the cytoplasm and promotes bladder cancer migration, invasion and metastasis through a circ0001361/miR-491-5p/MMP9 ceRNA axis. High circ0001361 expression correlates with aggressive clinicopathological features and poor overall survival, suggesting potential prognostic and therapeutic value.

Confidence score:

0.8769

Other information
Title:

Hsa_circ_0001361 promotes bladder cancer invasion and metastasis through miR-491-5p/MMP9 axis.

Journal: Oncogene
Published: 2020
PubMed ID: 31705065
Study type:

combined biological and clinical study

Data availability: GSE136919
Code availability: -