circRNA basic information
circBase ID: -
Name: -
Synonym: hsa_circRNA_002178
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: Hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; paracancerous tissues / adjacent nontumor tissues

Cell lines:

Huh7; Hep3B; HepG2; HCCLM3; SK-hep1; L02

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SRSF1
Associated microRNA: -
Biological function: Promotes HCC cell proliferation, migration, invasion, EMT, and xenograft tumor growth.
Molecular mechanism: Binds SRSF1 mRNA 3′-UTR and increases SRSF1 mRNA stability, leading to increased SRSF1 expression; SRSF1 mediates the pro-malignant effects.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); mRNA stability (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; Transwell Assay; Wound Healing Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Actinomycin D / DRB Stability Assay; Western Blot; In Vivo Animal Model

Clinical significance:

High hsa_circRNA_002178 level is associated with lower overall survival and it may serve as a diagnostic marker for HCC.

Description:

In HCC, hsa_circRNA_002178 is up-regulated and promotes proliferation, migration, invasion, EMT, and xenograft tumor growth. Mechanistically, it binds the SRSF1 mRNA 3′-UTR and increases SRSF1 mRNA stability and expression, and SRSF1 mediates the malignant phenotypes. High hsa_circRNA_002178 is linked to poorer overall survival and suggested as a diagnostic marker.

Confidence score:

0.8322

Other information
Title:

A Novel circRNA hsa_circRNA_002178 as a Diagnostic Marker in Hepatocellular Carcinoma Enhances Cell Proliferation, Invasion, and Tumor Growth by Stabilizing SRSF1 Expression.

Journal: Journal of oncology
Published: 2022
PubMed ID: 36065311
Study type:

combined biological and clinical study

Data availability: GSE97332
Code availability: -