circRNA basic information
circBase ID: hsa_circ_0017639
Name: hsa_circ_SFMBT2
Synonym: circ-SFMBT2
Host Gene: SFMBT2
Genomic location(hg19): chr10:7290509-7327916:-
Genomic location(hg38): chr10:7248547-7285954:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissue sections

Cell lines:

SGC-7901; MGC-803; MKN-28; BGC823; GES-1; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: USP3
Associated microRNA: miR-224-5p
Biological function: Promotes gastric cancer cell proliferation, migration, tumor growth and metastasis; downregulation suppresses these malignant phenotypes.
Molecular mechanism: hsa_circ_0017639 functions as a ceRNA by sponging miR-224-5p and regulating the miR-224-5p/USP3 axis, thereby upregulating USP3.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); metastasis (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Bioinformatics Analysis; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; In Vivo Animal Model

Clinical significance:

Potential effective therapeutic target for gastric cancer.

Description:

hsa_circ_0017639 is upregulated in gastric cancer cell lines and mainly localized in the cytoplasm. It promotes gastric cancer proliferation, migration and xenograft tumor growth by sponging miR-224-5p and regulating USP3 through the miR-224-5p/USP3 axis, suggesting potential therapeutic relevance.

Confidence score:

0.657

Other information
Title:

Hsa_circ_0017639 expression promotes gastric cancer proliferation and metastasis by sponging miR-224-5p and upregulating USP3.

Journal: Gene
Published: 2020
PubMed ID: 32376451
Study type:

biological research

Data availability: -
Code availability: -