circRNA basic information
circBase ID: hsa_circ_0020093
Name: hsa_circ_ATRNL1
Synonym: circATRNL1 / circ_0020093
Host Gene: ATRNL1
Genomic location(hg19): chr10:116879948-116889297:+
Genomic location(hg38): chr10:115120184-115129535:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008170
MONDO name: ovarian cancer
Disease details: ovarian cancer / OC
Disease DO ID:
2394
Disease MeSH ID:
D010051
Disease NCIt ID:
C7431
Disease ICD11 ID:
685124533
Disease OMIM ID:
167000
Species: Human
Species details: Homo sapiens
Tissue specimen:

OC tissues; adjacent normal tissues

Cell lines:

A2780; OVCAR3; CAOV3; SKOV3; IOSE386; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: LRPPRC, LATS2, YAP
Associated microRNA: miR-107
Biological function: Inhibits proliferation, migration and invasion; promotes apoptosis; suppresses tumor growth in vivo.
Molecular mechanism: Binds LRPPRC to inhibit its activity, reducing mitochondrial mRNA levels and mitochondria abundance; acts as a miR-107 sponge to upregulate LATS2, increasing phosphorylated YAP and inhibiting YAP activity.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); Hippo/YAP (inhibits); mitochondrial function (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Western Blot; Luciferase Reporter Assay; RNA-seq; Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Bioinformatics Analysis; ROC Analysis

Clinical significance:

Good diagnostic utility in OC tissues; expression negatively correlated with FIGO stages, grades, peritoneal implantation, and CA125 levels; potential prognostic biomarker and therapeutic target.

Description:

hsa_circ_0020093 is down-regulated in ovarian cancer and acts as a tumor suppressor. It binds the mitochondrial protein LRPPRC to reduce mitochondrial mRNA levels/mitochondria abundance, and sponges miR-107 to upregulate LATS2, leading to increased YAP phosphorylation and reduced YAP activity, thereby inhibiting malignant behaviors and tumor growth.

Confidence score:

0.8073

Other information
Title:

hsa_circ_0020093 suppresses ovarian cancer progression by modulating LRPPRC activity and miR-107/LATS2 signaling.

Journal: Biology direct
Published: 2024
PubMed ID: 39164777
Study type:

combined biological and clinical study

Data availability: supplementary information online; from the corresponding author on reasonable request
Code availability: -