circRNA basic information
circBase ID: hsa_circ_0017272
Name: hsa_circ_HNRNPU
Synonym: circHNRNPU / circ-HNRNPU
Host Gene: HNRNPU
Genomic location(hg19): chr1:245018274-245026032:-
Genomic location(hg38): chr1:244854972-244862730:-
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009693
MONDO name: plasma cell myeloma
Disease details: multiple myeloma / MM
Disease DO ID:
9538
Disease MeSH ID:
D009101
Disease NCIt ID:
C3242
Disease ICD11 ID:
1582389689; 526287100
Disease OMIM ID:
254500
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow; paraffin-embedded MM tissues; blood

Cell lines:

ARP1; CAG; HEK-293; HS-5

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SKP2-NM_001243120.2, c-Myc
Associated microRNA: -
Biological function: promotes MM progression by enhancing proliferation, increasing G2/M cell-cycle proportion, and promoting clonal expansion; contributes to bone marrow microenvironment interference via exosomal secretion
Molecular mechanism: circHNRNPU encodes a 603-aa protein isoform that regulates alternative splicing (SKP2 exon skipping), leading to reduced c-Myc ubiquitination and stabilization of c-Myc; circHNRNPU is secreted via exosomes to affect BM niche cells
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ubiquitination (inhibits); other pathway/process (promotes)

Detected method:
Q
H
M
Validation methods:

Microarray; Bioinformatics Analysis; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; ISH (In Situ Hybridization); Clinical Sample Validation; Cohort Study; Survival Analysis; Transfection; MTT; Colony Formation Assay; Cell Cycle Assay; In Vivo Animal Model; RIP (RNA Immunoprecipitation); RNA-seq; Western Blot; IF (Immunofluorescence); Transwell Assay; Co-IP

Clinical significance:

Increased circHNRNPU was associated with poor outcomes in four independent MM patient cohorts; higher circHNRNPU expression was associated with inferior EFS survival; proposed as diagnostic biomarker/therapeutic marker

Description:

circHNRNPU (hsa_circ_0017272) is up-regulated in IgD MM/MM and associated with inferior clinical outcomes. It is secreted via exosomes and can be translated into circHNRNPU_603aa, which promotes MM proliferation and cell-cycle progression by regulating SKP2 exon skipping to reduce c-Myc ubiquitination and stabilize c-Myc.

Confidence score:

0.8792

Other information
Title:

A novel protein encoded by circHNRNPU promotes multiple myeloma progression by regulating the bone marrow microenvironment and alternative splicing.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2022
PubMed ID: 35260179
Study type:

combined biological and clinical study

Data availability: GSE174501; GSE174510; GSE2658; GSE9782; GSE19784
Code availability: -