circRNA basic information
circBase ID: hsa_circ_0001627
Name: hsa_circ_BACH2
Synonym: -
Host Gene: BACH2
Genomic location(hg19): chr6:90959407-90981660:-
Genomic location(hg38): chr6:90249688-90271941:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid carcinoma
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tumor tissues; paratumor tissues

Cell lines:

K1; IHH-4; BCPAP; TCP1; TPC-1; Nthy-ori 3-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LMO4, AGO2
Associated microRNA: miR-139-5p
Biological function: promotes proliferation, migration, and invasion; promotes tumor growth in vivo
Molecular mechanism: circBACH2 acts as a miRNA sponge for miR-139-5p to relieve repression of LMO4 (ceRNA mechanism)
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Bioinformatics Analysis; Transfection; CCK8; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; TUNEL; IHC (Immunohistochemistry); Clinical Sample Validation; Survival Analysis; ROC Analysis

Clinical significance:

circBACH2 can be used as a tumor biomarker of PTC and is related to overall survival; ROC AUC=0.8631

Description:

circBACH2 (hsa_circ_0001627), derived from BACH2, is up-regulated in papillary thyroid carcinoma and mainly localizes to the cytoplasm. It promotes PTC proliferation, migration, invasion and in vivo tumor growth by sponging miR-139-5p and de-repressing LMO4, forming a circBACH2/miR-139-5p/LMO4 ceRNA axis. High circBACH2 expression is associated with worse overall survival and shows diagnostic potential (AUC 0.8631).

Confidence score:

0.807

Other information
Title:

Circular RNA circBACH2 plays a role in papillary thyroid carcinoma by sponging miR-139-5p and regulating LMO4 expression.

Journal: Cell death & disease
Published: 2019
PubMed ID: 30796202
Study type:

combined biological and clinical study

Data availability: -
Code availability: -