circRNA basic information
circBase ID: hsa_circ_0004592
Name: hsa_circ_STK3
Synonym: Circ_0004592
Host Gene: STK3
Genomic location(hg19): chr8:99718694-99719539:-
Genomic location(hg38): chr8:98706466-98707311:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; plasma; matched normal gastric mucosal tissues; para-cancerous tissues

Cell lines:

HGC-27; BGC-823; MKN-1; MKN-45; MGC-803; SGC-7901

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CEA, CA199
Associated microRNA: -
Biological function: auxiliary diagnostic biomarker for gastric cancer; associated with tumor differentiation, tumor invasion depth, and lymph node metastasis; decreases after surgical resection
Molecular mechanism: -
Biological pathway or process:

not specified

Detected method:
Q
S
Validation methods:

circRNA-seq; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; ROC Analysis

Clinical significance:

Plasma circ_0004592 differentiates GC patients from healthy donors (AUC 0.787) and decreases after surgery; high levels associate with histological classification, depth of tumor invasion, and lymph node metastasis.

Description:

circ_0004592 (hsa_circ_0004592, from STK3) is up-regulated in gastric cancer tissues and patient plasma, including in precancerous lesions compared with healthy controls. Plasma levels decrease after tumor resection and show diagnostic value (ROC AUC ~0.787), with higher levels associated with invasion depth and lymph node metastasis.

Confidence score:

0.6481

Other information
Title:

Circ_0004592: An auxiliary diagnostic biomarker for gastric cancer.

Journal: World journal of gastrointestinal oncology
Published: 2024
PubMed ID: 38994162
Study type:

combined biological and clinical study

Data availability: -
Code availability: -