circRNA basic information
circBase ID: hsa_circ_0008043
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr9:114332370-114348445:-
Genomic location(hg38): chr9:111570090-111586165:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent non-tumor tissues; paracancerous non-tumor tissues

Cell lines:

Hep3B; SNU449; Huh7; Focus; MHCC97H; HA22T; HCCLM3; THLE3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RAB21
Associated microRNA: miR-326
Biological function: promotes proliferation, migration, invasion, EMT, and tumor growth in HCC
Molecular mechanism: ceRNA mechanism: circ_0008043 sponges miR-326 to release RAB21, promoting malignant phenotypes
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Transfection; MTT; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; In Vivo Animal Model; ROC Analysis

Clinical significance:

Diagnostic value (ROC AUC=0.9589) and association with AFP, tumor size, differentiation, and distant metastasis

Description:

circ_0008043 is up-regulated in HCC tissues and cell lines and acts as an oncogenic circRNA. It promotes proliferation, migration/invasion and EMT by sponging miR-326 to increase RAB21, and its knockdown suppresses xenograft tumor growth. It also shows diagnostic potential by ROC analysis and correlates with aggressive clinicopathologic features.

Confidence score:

0.8315

Other information
Title:

Circular RNA Circ_0008043 promotes the proliferation and metastasis of hepatocellular carcinoma cells by regulating the microRNA (miR)-326/RAB21 axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35220907
Study type:

combined biological and clinical study

Data availability: GSE155949
Code availability: -