circRNA basic information
circBase ID: hsa_circ_0086414
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr9:16435552-16437522:-
Genomic location(hg38): chr9:16435554-16437524:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

A549; NCI-H1299; HCC827; 16HBE

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: EGFR
Associated microRNA: hsa-miR-103a-3p
Biological function: diagnostic biomarker potential for LUAD; associated with EGFR mutation status
Molecular mechanism: Hypothesized miRNA-binding involvement in EGFR mutation; miRNA targets predicted by bioinformatics (not experimentally validated).
Biological pathway or process:

ceRNA regulation (other); EGFR (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Part of a two-circRNA plasma diagnostic signature for LUAD (AUC 0.81); high plasma hsa_circ_0086414 expression correlates with EGFR mutations.

Description:

hsa_circ_0086414 is down-regulated in LUAD plasma and LUAD cell lines and, together with hsa_circ_0005962, forms a plasma circRNA diagnostic signature for LUAD. Higher plasma hsa_circ_0086414 levels are associated with EGFR mutation status, and the study hypothesizes a miRNA-binding mechanism based on bioinformatic prediction.

Confidence score:

0.5047

Other information
Title:

A two-circular RNA signature as a noninvasive diagnostic biomarker for lung adenocarcinoma.

Journal: Journal of translational medicine
Published: 2019
PubMed ID: 30777071
Study type:

combined biological and clinical study

Data availability: GSE101586
Code availability: -