circRNA basic information
circBase ID: hsa_circ_0003945
Name: hsa_circ_UBAP2
Synonym: Circ_0003945
Host Gene: UBAP2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissue; adjacent normal liver tissue; plasma

Cell lines:

LO2; HepG2; MHCC97L; MHCC97H; HCCLM3; SUN387; SK-Hep1; Li-7; Hep3B; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LGR4, beta-catenin, AGO2
Associated microRNA: hsa-miR-34c-5p
Biological function: Promotes HCC cell proliferation, migration, invasion, and tumor growth.
Molecular mechanism: Acts as a ceRNA by sponging miR-34c-5p to upregulate LGR4, thereby activating the Wnt/beta-catenin pathway.
Biological pathway or process:

Wnt/beta-catenin (promotes); proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Bioinformatics Analysis; Microarray; RT-qPCR; Clinical Sample Validation; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

Higher Circ_0003945 expression correlates with tumour size and CNLC stage; plasma circulating Circ_0003945 is increased in HCC patients vs non-HCC groups, suggesting diagnostic/prognostic biomarker potential.

Description:

Hsa_circ_0003945 (Circ_0003945), derived from UBAP2, is up-regulated in HCC tissue and also elevated in patient plasma. It promotes HCC cell proliferation/migration/invasion and xenograft growth by sponging miR-34c-5p to increase LGR4 and activate Wnt/beta-catenin signaling (e.g., c-Myc, Cyclin D1).

Confidence score:

0.8707

Other information
Title:

Hsa_circ_0003945 promotes progression of hepatocellular carcinoma by mediating miR-34c-5p/LGR4/beta-catenin axis activity.

Journal: Journal of cellular and molecular medicine
Published: 2022
PubMed ID: 35170199
Study type:

combined biological and clinical study

Data availability: GSE78520; GSE94508; GSE97332
Code availability: -