circRNA basic information
circBase ID: hsa_circ_0001085
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr2:191765289-191789319:+
Genomic location(hg38): chr2:190900563-190924593:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008315
MONDO name: prostate cancer
Disease details: prostate cancer / PCa
Disease DO ID:
10283
Disease MeSH ID:
D011471
Disease NCIt ID:
C7378
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

PC-3M IE8; PC-3

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: AKT1, PIK3CG, TGFBR2, MAPK1
Associated microRNA: hsa-miR-196b-5p, hsa-miR-451a
Biological function: May play a regulatory role in prostate cancer cells in the EMT induction model by indirectly regulating PI3K-Akt, TGF-beta, and MAPK signaling-related proteins through miRNAs.
Molecular mechanism: Predicted circRNA-miRNA-mRNA/protein regulatory network involving hsa-miR-196b-5p and hsa-miR-451a and downstream PI3K-Akt, TGF-beta, and MAPK signaling components.
Biological pathway or process:

PI3K/AKT (other); TGF-beta/SMAD (other); MAPK (other); EMT (promotes); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; circRNA-seq; Bioinformatics Analysis

Clinical significance:

-

Description:

hsa_circ_0001085 was differentially expressed in an IFN-gamma-induced prostate cancer EMT model and validated by qPCR. The study predicted that it may regulate PI3K-Akt, TGF-beta, and MAPK signaling through hsa-miR-196b-5p and hsa-miR-451a, suggesting a role in EMT-related prostate cancer cell regulation.

Confidence score:

0.4943

Other information
Title:

Screening and identification of epithelial-to-mesenchymal transition-related circRNA and miRNA in prostate cancer.

Journal: Pathology, research and practice
Published: 2020
PubMed ID: 31882179
Study type:

biological research

Data availability: Supplementary material related to this article can be found, in the online version, at doi:https://doi.org/10.1016/j.prp.2019.152784
Code availability: -