circRNA basic information
circBase ID: hsa_circ_0000711
Name: hsa_circ_NFATC3
Synonym: circNFATC3 / circular nuclear factor of activated T cells 3
Host Gene: NFATC3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; paraffin-embedded samples (TMA)

Cell lines:

SGC7901; BGC823; HGC-27; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IGF2BP3, TRIM25, CCND1
Associated microRNA: -
Biological function: promotes proliferation of gastric cancer cells in vitro and in vivo
Molecular mechanism: CircNFATC3 binds IGF2BP3 in the cytoplasm and prevents TRIM25-mediated ubiquitination to stabilize IGF2BP3 protein, enhancing IGF2BP3-CCND1 axis and promoting CCND1 mRNA stability.
Biological pathway or process:

proliferation (promotes); mRNA stability (promotes); ubiquitination (inhibits)

Detected method:
Q
H
Validation methods:

circRNA-seq; RIP (RNA Immunoprecipitation); Sanger Sequencing; RNase R Treatment; RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; ISH (In Situ Hybridization); RNA Pull-Down; IF (Immunofluorescence); Co-IP; Transfection; CCK8; Colony Formation Assay; EdU Staining; In Vivo Animal Model; IHC (Immunohistochemistry); Actinomycin D / DRB Stability Assay; Western Blot

Clinical significance:

CircNFATC3 was positively associated with tumor volume.

Description:

CircNFATC3 is upregulated in gastric cancer and promotes tumor cell proliferation. It binds IGF2BP3 in the cytoplasm, inhibits TRIM25-mediated ubiquitination to stabilize IGF2BP3, and thereby enhances CCND1 mRNA stability.

Confidence score:

0.8467

Other information
Title:

CircNFATC3 promotes the proliferation of gastric cancer through binding to IGF2BP3 and restricting its ubiquitination to enhance CCND1 mRNA stability.

Journal: Journal of translational medicine
Published: 2023
PubMed ID: 37340423
Study type:

combined biological and clinical study

Data availability: 10.1186/s12967-023-04235-y
Code availability: -