circRNA basic information
circBase ID: -
Name: hsa_circ_CLK1
Synonym: circular-CDC like kinase 1
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004958
MONDO name: oral cavity squamous cell carcinoma
Disease details: oral squamous cell carcinoma / OSCC
Disease DO ID:
0050866
Disease MeSH ID:
-
Disease NCIt ID:
C4833
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

UM1; HSC-2; SG

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Y-box protein 2 (YBX2), BCL2, BAX
Associated microRNA: miR-18b-5p
Biological function: Promotes OSCC cell viability and proliferation and suppresses apoptosis.
Molecular mechanism: circ-CLK1 acts via a ceRNA mechanism by targeting miR-18b-5p to regulate YBX2, thereby inhibiting apoptosis in OSCC cells.
Biological pathway or process:

apoptosis (inhibits); proliferation (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Western Blot; Luciferase Reporter Assay; RNA Pull-Down; Bioinformatics Analysis

Clinical significance:

circ-CLK1 can serve as a potential biomarker for OSCC; high circ-CLK1 levels were significantly associated with lymph node metastasis and TNM stage.

Description:

circ-CLK1 is up-regulated in OSCC patient samples and OSCC cell lines. Functionally, circ-CLK1 promotes viability/proliferation and suppresses apoptosis, at least partly by sponging miR-18b-5p to relieve repression of YBX2.

Confidence score:

0.7032

Other information
Title:

Circular CDC like kinase 1 suppresses cell apoptosis through miR-18b-5p/Y-box protein 2 axis in oral squamous cell carcinoma.

Journal: Bioengineered
Published: 2022
PubMed ID: 35156507
Study type:

combined biological and clinical study

Data availability: -
Code availability: -