circRNA basic information
circBase ID: hsa_circ_0004277
Name: hsa_circ_WDR37
Synonym: -
Host Gene: WDR37
Genomic location(hg19): chr10:1125950-1126416:+
Genomic location(hg38): chr10:1080010-1080476:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018874
MONDO name: acute myeloid leukemia
Disease details: acute myeloid leukemia
Disease DO ID:
9119
Disease MeSH ID:
D015470
Disease NCIt ID:
C3171
Disease ICD11 ID:
-
Disease OMIM ID:
601626
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: SH3GL2, PPARGC1A, PIP4K2C, SH2B3, ZNF275, ATP1B4
Associated microRNA: hsa-miR-138-5p, hsa-miR-30c-1-3p, hsa-miR-892b, hsa-miR-571, hsa-miR-328-3p
Biological function: Potential diagnostic biomarker and treatment target; expression dynamically changes with AML stage and is restored after successful chemotherapy.
Molecular mechanism: Predicted to act as a miRNA sponge and form a circRNA-miRNA-mRNA/gene network (bioinformatics prediction).
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Potential diagnostic biomarker for AML; ROC AUC = 0.957; chemotherapy restores expression and increased level is associated with successful treatment.

Description:

hsa_circ_0004277 is significantly down-regulated in newly diagnosed AML bone marrow samples, restored in complete remission after chemotherapy, and down-regulated again in relapsed-refractory cases. It shows strong diagnostic potential (AUC 0.957) and is proposed to function via a predicted miRNA-sponge circRNA-miRNA-mRNA network (e.g., involving miR-138-5p/miR-30c-1-3p and targets such as SH3GL2, PPARGC1A, and SH2B3).

Confidence score:

0.5963

Other information
Title:

Characterization of hsa_circ_0004277 as a New Biomarker for Acute Myeloid Leukemia via Circular RNA Profile and Bioinformatics Analysis.

Journal: International journal of molecular sciences
Published: 2017
PubMed ID: 28282919
Study type:

combined biological and clinical study

Data availability: GSE94591
Code availability: -