circRNA basic information
circBase ID: -
Name: hsa_circ_WHSC1
Synonym: circW7
Host Gene: WHSC1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: Hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumorous tissue; adjacent non-tumorous liver tissue

Cell lines:

LO2; Huh7

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Ago2
Associated microRNA: -
Biological function: promotes proliferation; promotes cell transformation (anchorage-independent growth)
Molecular mechanism: Interacts with Ago2, suggesting miRNA-associated regulation/sponging potential; oncogenic effects demonstrated by overexpression in cell lines.
Biological pathway or process:

proliferation (promotes); metastasis (other); ceRNA regulation (other)

Detected method:
Q
S
M
Validation methods:

Microarray; RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Transfection; Colony Formation Assay; CCK8; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Associated with tumor grade and tumor capsulation; shows ROC performance for distinguishing tumor grade groups.

Description:

circW7 is up-regulated in HCC and associated with aggressive clinicopathological features. Overexpression promotes proliferation and anchorage-independent growth in liver cell lines, and it can interact with Ago2, suggesting miRNA-related regulation.

Confidence score:

0.835

Other information
Title:

Clinicopathological-Associated Regulatory Network of Deregulated circRNAs in Hepatocellular Carcinoma.

Journal: Cancers
Published: 2021
PubMed ID: 34199580
Study type:

combined biological and clinical study

Data availability: GSE155949; GSE156087; GSE138178
Code availability: -