circRNA basic information
circBase ID: hsa_circ_0039411
Name: hsa_circ_MMP2
Synonym: circRNA 0039411
Host Gene: MMP2
Genomic location(hg19): chr16:55523562-55540586:+
Genomic location(hg38): chr16:55489650-55506674:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0003781
MONDO name: bronchitis
Disease details: Bronchial inflammation
Disease DO ID:
6132
Disease MeSH ID:
D001991
Disease NCIt ID:
C2911
Disease ICD11 ID:
11753425
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

16HBE; BEAS-2B; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: STAT3, phospho-STAT3
Associated microRNA: miR-93-5p
Biological function: Mediates Nd 2 O 3-induced inflammation by increasing IL-6 and IL-8, inhibits proliferation of Nd 2 O 3-induced 16HBE cells, and promotes G0/G1 cell cycle arrest; it was not involved in Nd 2 O 3-induced cell apoptosis.
Molecular mechanism: circ_0039411 acts as a ceRNA by sponging miR-93-5p, thereby regulating STAT3 phosphorylation and mediating Nd 2 O 3-induced inflammation and dysfunction.
Biological pathway or process:

inflammation (promotes); proliferation (inhibits); cell cycle (inhibits); ceRNA regulation (other); JAK/STAT (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Luciferase Reporter Assay; Transfection; EdU Staining; Cell Cycle Assay; Annexin V/PI Flow Cytometry; ELISA; Western Blot; Bioinformatics Analysis

Clinical significance:

May serve as a molecular target for prevention of Nd 2 O 3-induced health damage and support risk/hazard assessment.

Description:

circ_0039411 is an MMP2-derived human circRNA upregulated in Nd 2 O 3-treated bronchial epithelial cells. It promotes inflammatory cytokine production and anti-proliferative effects by arresting cells at G0/G1, functioning as a miR-93-5p sponge that enhances STAT3 phosphorylation.

Confidence score:

0.6941

Other information
Title:

Circular RNA 0039411 Is Involved in Neodymium Oxide-induced Inflammation and Antiproliferation in a Human Bronchial Epithelial Cell Line via Sponging miR-93-5p.

Journal: Toxicological sciences : an official journal of the Society of Toxicology
Published: 2019
PubMed ID: 30903189
Study type:

biological research

Data availability: Supplementary table 1; Supplementary table 2; Supplementary table 3
Code availability: -