circRNA basic information
circBase ID: hsa_circ_0001535
Name: hsa_circ_FAM13B
Synonym: circ_0001535
Host Gene: FAM13B
Genomic location(hg19): chr5:137320945-137324004:-
Genomic location(hg38): chr5:137985256-137988315:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor samples; adjacent non-cancer tissues; xenograft tumors

Cell lines:

HCT116; LoVo; SW480; SW620; FHC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LASP1, Ago2
Associated microRNA: miR-485-5p
Biological function: promotes proliferation, invasion, stemness, and tumor growth; inhibits apoptosis
Molecular mechanism: ceRNA mechanism: circ_0001535 sponges miR-485-5p to upregulate LASP1
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); invasion (promotes); stemness (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Colony Formation Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0001535 had a poor overall survival rate.

Description:

circ_0001535 is up-regulated in colorectal cancer and promotes malignant phenotypes (proliferation, invasion, stemness) while suppressing apoptosis. Mechanistically, it mainly localizes to the cytoplasm and functions as a ceRNA by sponging miR-485-5p, thereby increasing LASP1 expression and enhancing tumor growth in vivo.

Confidence score:

0.8712

Other information
Title:

Circ_0001535 Facilitates Tumor Malignant Progression by miR-485-5p/LASP1 Axis in Colorectal Cancer.

Journal: Balkan medical journal
Published: 2022
PubMed ID: 36172827
Study type:

combined biological and clinical study

Data availability: The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.
Code availability: -