circRNA basic information
circBase ID: hsa_circ_0000566
Name: hsa_circ_VRK1
Synonym: -
Host Gene: VRK1
Genomic location(hg19): chr14:97299803-97327072:+
Genomic location(hg38): chr14:96833466-96860735:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

osteosarcomas; chondroma

Cell lines:

143B; HOS; MG-63; U2OS; SJSA-1; hFOB1.19; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HIF-1alpha, VHL
Associated microRNA: -
Biological function: promotes proliferation, migration, invasion, metastasis and tumorigenesis; inhibits apoptosis; promotes glycolysis under hypoxic stress
Molecular mechanism: HIF-1alpha transcriptionally induces Hsa_circ_0000566; Hsa_circ_0000566 binds HIF-1alpha and VHL, disrupts VHL-HIF-1alpha interaction, inhibits HIF-1alpha ubiquitination/degradation, stabilizes HIF-1alpha, forming a positive feedback loop to enhance glycolysis
Biological pathway or process:

glycolysis (promotes); Warburg effect (promotes); ubiquitination (inhibits); metastasis (promotes); invasion (promotes); proliferation (promotes); apoptosis (inhibits)

Detected method:
Q
H
M
Validation methods:

Microarray; RT-qPCR; FISH / smFISH; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Western Blot; RIP (RNA Immunoprecipitation); RNA Pull-Down; Co-IP; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry)

Clinical significance:

Hsa_circ_0000566 expression is higher in osteosarcoma tissues than in chondroma controls, suggesting potential as a therapeutic target

Description:

Hsa_circ_0000566 is upregulated in osteosarcoma, especially under hypoxia, and promotes malignant phenotypes and glycolysis. Mechanistically, HIF-1alpha transcriptionally induces Hsa_circ_0000566, while Hsa_circ_0000566 binds HIF-1alpha and VHL to block VHL-mediated ubiquitination, stabilizing HIF-1alpha and forming a positive feedback loop that enhances the Warburg effect.

Confidence score:

0.8748

Other information
Title:

Positive Feedback Regulation of Circular RNA Hsa_circ_0000566 and HIF-1alpha promotes Osteosarcoma Progression and Glycolysis Metabolism.

Journal: Aging and disease
Published: 2023
PubMed ID: 37008055
Study type:

combined biological and clinical study

Data availability: All data pertaining this research are accessible from the authors upon reasonable request.
Code availability: -