circRNA basic information
circBase ID: hsa_circ_0001944
Name: hsa_circ_FIRRE
Synonym: circFIRRE
Host Gene: FIRRE
Genomic location(hg19): chrX:130883333-130928494:-
Genomic location(hg38): chrX:131749305-131794466:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; adjacent normal tissues

Cell lines:

AGS; SGC7901

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: GSPT1
Associated microRNA: miR-498
Biological function: promotes proliferation; promotes invasion; promotes migration; promotes tumorigenesis
Molecular mechanism: hsa_circ_0001944 acts as a miRNA sponge for miR-498 to increase GSPT1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); invasion (promotes); migration (promotes); tumorigenesis (promotes)

Detected method:
Q
M
Validation methods:

Bioinformatics Analysis; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ROC Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Transwell Assay; Wound Healing Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Microarray

Clinical significance:

ROC curves demonstrated that hsa_circ_0001944 may be a potential biomarker of gastric cancer (AUC = 90.5%); high hsa_circ_0001944 expression was correlated with poor prognostic factors (including poor differentiation and advanced TNM stage).

Description:

hsa_circ_0001944 (circFIRRE) is up-regulated in gastric cancer and functions as an oncogenic circRNA. It mainly localizes to the cytoplasm and promotes proliferation, invasion, migration, and in vivo tumor growth by sponging miR-498 to increase GSPT1 expression, forming the hsa_circ_0001944/miR-498/GSPT1 axis.

Confidence score:

0.8792

Other information
Title:

Hsa_circ_0001944 enhanced GSPT1 expression via sponging miR-498 to promote proliferation and invasion of gastric cancer.

Journal: Journal of clinical laboratory analysis
Published: 2023
PubMed ID: 36597856
Study type:

combined biological and clinical study

Data availability: GSE121445
Code availability: -