circRNA basic information
circBase ID: hsa_circ_0007099
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr15:89656955-89659752:+
Genomic location(hg38): chr15:89113724-89116521:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; para-cancerous tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: unknown
Molecular mechanism: not specified
Biological pathway or process:

PI3K/AKT (other)
Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0007099 is reported as down-regulated in the HCC S2 subclass in this RNA-seq based analysis. The study does not provide mechanistic validation; it only suggests a possible inverse association with the MYC and PI3K/Akt activation features of S2.
Confidence score:

0.1768
Other information
Title:

Transcriptome sequencing of hepatocellular carcinoma uncovers multiple types of dysregulated ncRNAs.

Journal: Frontiers in oncology
Published: 2022
PubMed ID: 36132143
Study type:

combined biological and clinical study
Data availability: SRP039694; SRP050551; SRP062885; SRP068976; SRP069212; SRP068498
Code availability: -