circRNA basic information
circBase ID: -
Name: hsa_circ_NFIX
Synonym: circNFIX
Host Gene: NFIX
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004781
MONDO name: acute myocardial infarction
Disease details: acute myocardial infarction
Disease DO ID:
9408
Disease MeSH ID:
-
Disease NCIt ID:
C35204
Disease ICD11 ID:
1334938734
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

myocardial tissues; myocardium

Cell lines:

H9c2

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
DN
Associated gene: coronary artery stenosis grade / CAS grade
Associated microRNA: -
Biological function: Auxiliary diagnostic biomarker for IHD-related SCD; indicates ischemic myocardial damage (decreased expression).
Molecular mechanism: Negative association with coronary artery stenosis grade (biomarker association).
Biological pathway or process:

not specified

Detected method:
Q
Validation methods:

RNase R Treatment; divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Cohort Study

Clinical significance:

Downregulated circNFIX distinguishes IHD-related SCD cases from controls (ROC AUC 0.868 overall) and is negatively correlated with coronary artery stenosis grade; combination with circSLC8A1 improves discrimination.

Description:

circNFIX is down-regulated in myocardium from IHD-related SCD autopsy cases (both MI and non-MI) and shows diagnostic value by ROC analysis. Its expression is negatively correlated with coronary artery stenosis grade, supporting its use as an auxiliary indicator of ischemic myocardial damage severity.

Confidence score:

0.6888

Other information
Title:

CircSLC8A1 and circNFIX can be used as auxiliary diagnostic markers for sudden cardiac death caused by acute ischemic heart disease.

Journal: Scientific reports
Published: 2021
PubMed ID: 33633191
Study type:

combined biological and clinical study

Data availability: Supplementary material available at 10.1038/s41598-021-84056-5
Code availability: -