circRNA basic information
circBase ID: hsa_circ_0086376
Name: hsa_circ_NFIB
Synonym: circNFIB
Host Gene: NFIB
Genomic location(hg19): chr9:14146687-14179779:-
Genomic location(hg38): chr9:14146688-14179780:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; adjacent normal tissues; breast tumors

Cell lines:

MDA-MB-231; MCF-7; MCF-10A

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: arachidonic acid, AA, phospholipase, PLA2, EIF4A3, U2AF65, 56 aa protein
Associated microRNA: -
Biological function: Inhibits breast cancer cell proliferation and invasion in vitro; inhibits tumor growth and metastasis in vivo; acts as a tumor suppressor; down-regulates arachidonic acid and decreases AA metabolites.
Molecular mechanism: circNFIB encodes a 56 aa protein and may inhibit synthesis of arachidonic acid by regulating phospholipase; EIF4A3 and U2AF65 may regulate circNFIB expression by binding to its flanking sequence.
Biological pathway or process:

proliferation (inhibits); invasion (inhibits); metastasis (inhibits); lipid metabolism (inhibits); other pathway/process (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; circRNA-seq; RT-qPCR; FISH / smFISH; Clinical Sample Validation; Transfection; MTT; EdU Staining; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); ELISA; Western Blot; Bioinformatics Analysis; RNA-seq

Clinical significance:

CircNFIB and its encoded protein may serve as therapy targets and biomarkers for breast cancer in the future.

Description:

circNFIB (hsa_circ_0086376), derived from NFIB, is down-regulated in breast cancer tissues and cells and functions as a tumor suppressor. It inhibits breast cancer proliferation, invasion, tumor growth, and metastasis, potentially through protein-coding capacity and suppression of arachidonic acid synthesis via phospholipase regulation. EIF4A3 and U2AF65 are proposed upstream regulators of circNFIB expression.

Confidence score:

0.8109

Other information
Title:

circNFIB decreases synthesis of arachidonic acid and inhibits breast tumor growth and metastasis.

Journal: European journal of pharmacology
Published: 2024
PubMed ID: 38128869
Study type:

combined biological and clinical study

Data availability: GSE192849; TCGA-BRCA; Supplementary data to this article can be found online at https://doi.org/10.1016/j.ejphar.2023.176221
Code availability: -