circRNA basic information
circBase ID: hsa_circ_0041732
Name: hsa_circ_FAM64A
Synonym: hsa_circRNA_101967 / circ_0041732
Host Gene: FAM64A
Genomic location(hg19): chr17:6350782-6351078:+
Genomic location(hg38): chr17:6447462-6447758:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: Breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues; tumor tissues

Cell lines:

BT-474; MDA-MB-231; MDA-MB-468; MCF 10A; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: E2F4, FAM64A, RelA, GLI4, IL-6, CCND1, CDC2, CCNB1, p65
Associated microRNA: miR-541-3p
Biological function: Promotes breast cancer cell proliferation and cell cycle progression, inhibits apoptosis, and accelerates tumor growth in vivo.
Molecular mechanism: E2F4 transcriptionally activates circ_0041732 from FAM64A; circ_0041732 acts as a ceRNA sponge for miR-541-3p to up-regulate RelA and GLI4, activating NF-kB and Hedgehog pathways.
Biological pathway or process:

NF-kappaB (promotes); Hedgehog (promotes); proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

-

Description:

circ_0041732 is an oncogenic circRNA up-regulated in breast cancer cells and tissues. Its up-regulation is driven by E2F4-mediated transcriptional activation of its host gene FAM64A, and it promotes proliferation, cell cycle progression, and xenograft tumor growth while suppressing apoptosis by sponging miR-541-3p to increase RelA and GLI4 and activate NF-kB and Hedgehog signaling.

Confidence score:

0.8478

Other information
Title:

circ_0041732 Promotes Breast Cancer Progression.

Journal: Molecular cancer research : MCR
Published: 2022
PubMed ID: 35838496
Study type:

biological research

Data availability: GSE101124; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE101124
Code availability: -