circRNA basic information
circBase ID: hsa_circ_0005870
Name: hsa_circ_SETD2
Synonym: circSETD2
Host Gene: SETD2
Genomic location(hg19): chr3:47079155-47088111:-
Genomic location(hg38): chr3:47037665-47046621:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0013209
MONDO name: metabolic dysfunction-associated steatotic liver disease
Disease details: metabolic dysfunction-associated fatty liver disease
Disease DO ID:
0080208
Disease MeSH ID:
D065626
Disease NCIt ID:
C84444
Disease ICD11 ID:
1912806631
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

liver tissue / liver tissues / MAFLD patient liver tissues

Cell lines:

HepG2

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CPS1 / carbamoyl phosphate synthetase 1
Associated microRNA: -
Biological function: circSETD2 promotes FFA-induced lipid accumulation and lipogenesis, suppresses fatty acid beta-oxidation, and exacerbates lipid metabolic disturbances and MAFLD progression.
Molecular mechanism: circSETD2 directly binds CPS1 and reduces CPS1 enzymatic activity, thereby impairing CPS1-mediated regulation of lipid homeostasis.
Biological pathway or process:

other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; circRNA-seq; RT-qPCR; FISH / smFISH; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; Oil Red O Staining; Western Blot; Bioinformatics Analysis; RNA-seq

Clinical significance:

circSETD2 is positioned as a promising prognostic biomarker and therapeutic target for MAFLD.

Description:

Human circSETD2 is a SETD2-derived circRNA significantly upregulated in MAFLD patient liver tissues and FFA-treated HepG2 cells. It promotes lipid metabolic dysregulation by binding CPS1 and reducing CPS1 enzymatic activity, thereby increasing lipogenesis and lipid accumulation while suppressing fatty acid beta-oxidation.

Confidence score:

0.8335

Other information
Title:

CircSETD2 impairs hepatic lipid homeostasis in metabolic dysfunction-associated fatty liver disease by binding CPS1.

Journal: International journal of biological macromolecules
Published: 2025
PubMed ID: 41224057
Study type:

combined biological and clinical study

Data availability: Data will be made available on request; Supplementary data to this article can be found online at https://doi.org/10.1016/j.ijbiomac.2025.148879
Code availability: -