circRNA basic information
circBase ID: -
Name: hsa_circ_SAMD4A
Synonym: hsa_circ_101356 / circular RNA sterile alpha motif domain containing 4A
Host Gene: SAMD4A
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tumor tissues; 5-Fu sensitive tissues; 5-Fu resistant tissues; tumor tissues

Cell lines:

SW480; HCT-116; SW480/5-Fu; HCT-116/5-Fu

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PFKFB3, MDR1, HK2, LDHA
Associated microRNA: miR-545-3p
Biological function: CircSAMD4A promotes 5-Fu resistance, cell viability, proliferation, glycolysis and tumor growth, and inhibits apoptosis in 5-Fu-resistant colorectal cancer.
Molecular mechanism: CircSAMD4A acts as a ceRNA/molecular sponge for miR-545-3p to upregulate PFKFB3 expression, thereby enhancing glycolysis and 5-Fu resistance in CRC.
Biological pathway or process:

ceRNA regulation (promotes); glycolysis (promotes); proliferation (promotes); apoptosis (inhibits); drug resistance (promotes); chemoresistance (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

High circSAMD4A expression is associated with lower 5-year overall survival and may be a therapeutic target for 5-Fu resistance in CRC.

Description:

CircSAMD4A is up-regulated in 5-Fu-resistant colorectal cancer tissues and cells and is associated with poorer 5-year overall survival. It promotes 5-Fu resistance, proliferation, glycolysis, and tumor growth while suppressing apoptosis by sponging miR-545-3p and up-regulating PFKFB3.

Confidence score:

0.8353

Other information
Title:

Circular RNA sterile alpha motif domain containing 4A contributes to cell 5-fluorouracil resistance in colorectal cancer by regulating the miR-545-3p/6-phosphofructo-2-kinase/fructose-2,6-bisphosphataseisotype 3 axis.

Journal: Anti-cancer drugs
Published: 2022
PubMed ID: 35276696
Study type:

combined biological and clinical study

Data availability: please contact the correspondence author for the data request
Code availability: -