circRNA basic information
circBase ID: hsa_circ_0020093
Name: hsa_circ_ATRNL1
Synonym: circ_0020093
Host Gene: ATRNL1
Genomic location(hg19): chr10:116879948-116889297:+
Genomic location(hg38): chr10:115120184-115129535:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005178
MONDO name: osteoarthritis
Disease details: Osteoarthritis
Disease DO ID:
8398
Disease MeSH ID:
D010003
Disease NCIt ID:
C3293
Disease ICD11 ID:
558562409
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

blood samples; serum samples

Cell lines:

C28/I2

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ERG, Ago2
Associated microRNA: miR-181a-5p
Biological function: Circ_0020093 overexpression promoted cell proliferation and alleviated IL-1beta-induced inflammatory response, apoptosis and ECM degradation in human chondrocytes.
Molecular mechanism: Circ_0020093 acts as a molecular sponge for miR-181a-5p, thereby promoting ERG expression and alleviating IL-1beta-induced chondrocyte injury.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); inflammation (inhibits); ceRNA regulation (other); other pathway/process (inhibits)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; ELISA; Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Circ_0020093 had diagnostic value for OA, with ROC AUC of 0.73 in serum samples.

Description:

Circ_0020093 is down-regulated in OA serum samples and IL-1beta-treated human chondrocytes. Its overexpression protects chondrocytes by promoting proliferation and suppressing inflammation, apoptosis and ECM degradation. Mechanistically, circ_0020093 sponges miR-181a-5p to relieve repression of ERG, and it also shows potential diagnostic value for OA.

Confidence score:

0.8322

Other information
Title:

Circ_0020093 Overexpression Alleviates Interleukin-1 Beta-induced Inflammation, Apoptosis and Extracellular Matrix Degradation in Human Chondrocytes by Targeting the miR-181a-5p/ERG Pathway.

Journal: Immunological investigations
Published: 2022
PubMed ID: 35012421
Study type:

combined biological and clinical study

Data availability: GSE79258; Please contact the correspondence author for the data request.
Code availability: -