circRNA basic information
circBase ID: hsa_circ_0002232
Name: hsa_circ_PTEN
Synonym: circPTEN1
Host Gene: PTEN
Genomic location(hg19): chr10:89624210-89693008:+
Genomic location(hg38): chr10:87864453-87933251:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

peritumor tissue; tumor tissue; adjacent nontumorous tissue samples

Cell lines:

NCM460; DLD1; LoVo; HCT116; SW480; 293 T

In vivo animal model:

patient-derived xenograft; cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: Smad4, Smad2, Smad3, eIF4A3
Associated microRNA: -
Biological function: Suppresses CRC progression/metastasis and inhibits TGF-beta-mediated migration and invasion; suppresses EMT.
Molecular mechanism: circPTEN1 directly binds Smad4 (MH2 domain) and disrupts Smad4 interaction with Smad2/3, reducing Smad complex formation and nuclear translocation, thereby suppressing transcription of EMT genes under TGF-beta1 stimulation; eIF4A3 binds flanking region to suppress circPTEN1 cyclization.
Biological pathway or process:

TGF-beta/SMAD (inhibits); EMT (inhibits); metastasis (inhibits); migration (inhibits); invasion (inhibits)

Detected method:
Q
B
H
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Northern Blot; FISH / smFISH; ISH (In Situ Hybridization); Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; Transwell Assay; In Vivo Animal Model; Western Blot; Co-IP; IF (Immunofluorescence)

Clinical significance:

Decreased circPTEN1 expression predicts poor survival; low circPTEN1 is associated with lymph node metastases, distant metastases, and advanced stage.

Description:

circPTEN1 (hsa_circ_0002232) is down-regulated in colorectal/colon cancer and functions as a tumor suppressor. It directly binds Smad4 (MH2 domain) to block Smad2/3-Smad4 complex formation and nuclear translocation, thereby inhibiting TGF-beta/SMAD-driven EMT and metastasis. Low circPTEN1 expression is associated with advanced metastatic features and poorer overall survival.

Confidence score:

0.8525

Other information
Title:

circPTEN1, a circular RNA generated from PTEN, suppresses cancer progression through inhibition of TGF-beta/Smad signaling.

Journal: Molecular cancer
Published: 2022
PubMed ID: 35135542
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -