circRNA basic information
circBase ID: hsa_circ_0002211
Name: hsa_circ_DDX17
Synonym: CircDDX17
Host Gene: DDX17
Genomic location(hg19): chr22:38890634-38897285:-
Genomic location(hg38): chr22:38494629-38501280:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; adjacent normal tissues

Cell lines:

MCF-7; MCF-10A; BT474; BT549; HCC2218; HBL-100

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: CDK1, p21
Associated microRNA: miR-605
Biological function: circDDX17 acts as a tumour suppressor in breast cancer; overexpression inhibits cell proliferation and colony formation, induces G0/G1 cell cycle arrest, and promotes apoptosis.
Molecular mechanism: circDDX17 functions as a competing endogenous RNA and sponge for miR-605, suppressing proliferation through regulation of cell cycle-related factors CDK1 and p21.
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); cell cycle (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot

Clinical significance:

Low circDDX17 expression was associated with tumour grade, lymph node infiltration, advanced TNM stage, and poor overall survival; it may serve as a potential biomarker and therapeutic target for breast cancer.

Description:

circDDX17 is downregulated in breast cancer tissues and cell lines and acts as a tumour suppressor. It sponges miR-605 to regulate cell cycle-related proteins CDK1 and p21, thereby inhibiting proliferation and colony formation, inducing cell cycle arrest, and promoting apoptosis. Its reduced expression is associated with aggressive clinicopathological features, suggesting biomarker and therapeutic potential.

Confidence score:

0.6829

Other information
Title:

CircDDX17 acts as a competing endogenous RNA for miR-605 in breast cancer progression.

Journal: European review for medical and pharmacological sciences
Published: 2020
PubMed ID: 32633371
Study type:

combined biological and clinical study

Data availability: TCGA
Code availability: -