circRNA basic information
circBase ID: hsa_circ_0001955
Name: hsa_circ_CSNK1G1
Synonym: hsa_circRNA_101555
Host Gene: CSNK1G1
Genomic location(hg19): chr15:64495280-64508912:-
Genomic location(hg38): chr15:64203081-64216713:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal liver tissues; matched paracancerous tissues; matched adjacent normal tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: H2AFX
Associated microRNA: hsa-miR-326, hsa-miR-145-5p
Biological function: promotes tumour growth and advancement (inferred via hub-gene-centered ceRNA network)
Molecular mechanism: ceRNA network: included in miR-145-5p/H2AFX axis as an upstream circRNA
Biological pathway or process:

ceRNA regulation (promotes); cell cycle (promotes); angiogenesis (promotes)

Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis

Clinical significance:

This circRNA was among upstream circRNAs of the final hub-gene network; hub genes/modules were associated with pathological stage, survival, and B-cell infiltration (circRNA implication is indirect).

Description:

hsa_circRNA_101555 is upregulated in HCC and included in the final ceRNA network as part of the miR-145-5p/H2AFX axis (together with other circRNAs). It is indirectly implicated as a cancer-promoting factor through ceRNA-mediated regulation of a hub gene.

Confidence score:

0.1768

Other information
Title:

Identification of CircRNAs that promote cancer and their potential contribution to hepatocellular carcinoma (HCC) pathogenesis.

Journal: Clinical and experimental medicine
Published: 2025
PubMed ID: 39961942
Study type:

bioinformatics study

Data availability: GSE78520; GSE94508; GSE97332; TCGA LIHC
Code availability: -