circRNA basic information
circBase ID: hsa_circ_0078602
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr6:160553263-160560899:+
Genomic location(hg38): chr6:160132231-160139867:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissue samples; adjacent normal liver tissue samples

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa-miR-1207-5p, hsa-miR-6787-5p, hsa-miR-940, hsa-miR-1202, hsa-miR-4459, hsa-miR-3194-5p
Biological function: Associated with prognosis in HCC; proposed tumor-suppressive role.
Molecular mechanism: Bioinformatically predicted association with multiple miRNAs; hypothesized miRNA-mediated regulation.
Biological pathway or process:

ceRNA regulation (other); proliferation (other); cell cycle (other); apoptosis (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; ROC Analysis; Survival Analysis; Cohort Study; Bioinformatics Analysis

Clinical significance:

Diagnostic biomarker potential (ROC AUC reported) and prognostic value (lower expression associated with worse prognosis).

Description:

hsa_circ_0078602 is down-regulated in hepatocellular carcinoma tissues versus adjacent non-cancerous tissues. Lower expression is associated with poorer overall survival and it shows diagnostic potential by ROC analysis. Mechanistically, the study reports bioinformatically predicted associations with several miRNAs, but no experimental mechanistic validation.

Confidence score:

0.5734

Other information
Title:

Circular RNA hsa_circ_0078602 may have potential as a prognostic biomarker for patients with hepatocellular carcinoma.

Journal: Oncology letters
Published: 2019
PubMed ID: 30675276
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during the present study are included in this published article.
Code availability: -