circRNA basic information
circBase ID: hsa_circ_0005654
Name: hsa_circ_PRDM5
Synonym: circ_0005654
Host Gene: PRDM5
Genomic location(hg19): chr4:121675707-121732604:-
Genomic location(hg38): chr4:120754552-120811449:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005180
MONDO name: Parkinson disease
Disease details: Parkinson's disease
Disease DO ID:
14330
Disease MeSH ID:
D010300
Disease NCIt ID:
C26845
Disease ICD11 ID:
296066191
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood

Cell lines:

SH-SY5Y; 293T; 293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: alpha-Syn, p62, SQSTM1/p62
Associated microRNA: miR-588
Biological function: Promotes alpha-Syn expression, accumulation and aggregation; suppresses autophagic clearance through the miR-588/p62 autophagy pathway.
Molecular mechanism: circ_0005654 acts as a molecular sponge for miR-588, enhancing alpha-Syn RNA/protein expression and regulating alpha-Syn through the miR-588/p62 autophagy pathway.
Biological pathway or process:

ceRNA regulation (promotes); autophagy (inhibits); other pathway/process (promotes)

Detected method:
S
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; RNA-seq; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; Western Blot; Bioinformatics Analysis

Clinical significance:

circ_0005654 showed diagnostic potential for PD and was proposed as a promising therapeutic candidate for targeted modulation of alpha-Syn aggregation.

Description:

circ_0005654 is up-regulated in peripheral blood of PD patients and is derived from the PRDM5 gene. In cellular PD models, it acts as a miR-588 sponge to promote alpha-Syn mRNA/protein expression and suppress alpha-Syn clearance through the miR-588/p62 autophagy pathway, contributing to alpha-Syn accumulation and aggregation. The study suggests circ_0005654 has diagnostic potential and may be a therapeutic target for PD.

Confidence score:

0.8193

Other information
Title:

circ_0005654 as a Sponge of the miR-588 Dual Pathway to Promote alpha-Synuclein Expression.

Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Published: 2025
PubMed ID: 40444442
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon request.
Code availability: -