circRNA basic information
circBase ID: -
Name: hsa_circ_MDM2
Synonym: circMDM2
Host Gene: MDM2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0003864
MONDO name: chronic lymphocytic leukemia/small lymphocytic lymphoma
Disease details: chronic lymphocytic leukemia / CLL
Disease DO ID:
6354
Disease MeSH ID:
-
Disease NCIt ID:
C27911
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CLL lymphocytes; healthy B-cells / normal B-cells / healthy B-lymphocytes

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: NFIX, SNTB2, RAF1
Associated microRNA: miR-137, miR-7
Biological function: boosts cancer development; manipulates cell cycle and apoptosis in CLL cells
Molecular mechanism: interaction network via miRNAs (miR-137; miR-193 family; miR-7) with mediators (NFIX, SNTB2, RAF1) to influence cell cycle, apoptosis, and PDGF signaling
Biological pathway or process:

cell cycle (other); apoptosis (inhibits); other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis; ROC Analysis; Survival Analysis; Cohort Study

Clinical significance:

Diagnostic biomarker (AUC reported) and prognostic association with 5-year OS (high level associated with worse OS).

Description:

circMDM2 is increased in CLL and included in a diagnostic/prognostic circRNA panel. Network analysis links circMDM2 to miRNA-mediated interactions (miR-137/miR-7 and miR-193 family) with targets such as NFIX, SNTB2 and RAF1, affecting cell cycle/apoptosis programs and contributing to CLL progression; higher expression correlates with worse OS in validation cohorts.

Confidence score:

0.5121

Other information
Title:

Circular RNA Expression Signatures Provide Promising Diagnostic and Therapeutic Biomarkers for Chronic Lymphocytic Leukemia.

Journal: Cancers
Published: 2023
PubMed ID: 36900344
Study type:

bioinformatics study

Data availability: GSE151159; GSE92626; GSE66117; GSE111014; GSE119103; GSE66121; GSE11154; GSE95352; GSE161711; GSE109085; GSE113386; GSE70830; GSE100026; GSE66228; GSE66167; GSE216288; GSE192685; GSE198454; GSE197811; GSE196741; GSE165087; GSE176141; GSE130385; GSE162427; GSE136634; GSE123777; GSE111015; E-MTAB-12124; E-MTAB-1176
Code availability: -