circRNA basic information
circBase ID: -
Name: hsa_circ_ZNF609
Synonym: circ-ZNF609
Host Gene: ZNF609
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005212
MONDO name: rhabdomyosarcoma
Disease details: rhabdomyosarcoma
Disease DO ID:
3247
Disease MeSH ID:
D012208
Disease NCIt ID:
C3359
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary tumor biopsies; skeletal muscle biopsies

Cell lines:

RD; RH4

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: p-Akt, Rb, p-Rb, E2F1, Akt
Associated microRNA: -
Biological function: promotes cell proliferation and regulates G1-S transition in ERMS-derived cells
Molecular mechanism: counteracts p-Akt proteasome-dependent degradation and affects pRb/Rb ratio
Biological pathway or process:

cell cycle (other); proliferation (promotes); PI3K/AKT (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNA-seq; FISH / smFISH; Transfection; Cell Cycle Assay; Flow Cytometry(Non-apoptosis/cycle); Western Blot; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

-

Description:

circ-ZNF609 is up-regulated in RMS (ERMS and ARMS) tumors and cell lines. In ERMS-derived RD cells, circ-ZNF609 knockdown induces a G1/S arrest and reduces p-Akt and pRb/Rb, with evidence that it counteracts proteasome-dependent degradation of p-Akt, supporting a role in promoting proliferation via PI3K/AKT-related cell-cycle control.

Confidence score:

0.6221

Other information
Title:

Circ-ZNF609 regulates G1-S progression in rhabdomyosarcoma.

Journal: Oncogene
Published: 2019
PubMed ID: 30670781
Study type:

combined biological and clinical study

Data availability: GSE117609
Code availability: -