circRNA basic information
circBase ID: -
Name: hsa_circ_SCYL2
Synonym: circSCYL2
Host Gene: SCYL2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

brain metastases; liver metastatic sites; lung metastatic sites; brain tissues

Cell lines:

MDA-MB-231; MDA-MB-231-luc; MDA-MB-231-Br; MDABR1; MDABR2; MDABR3; MCF-7

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: hnRNPA2B1, ACSL4 mRNA, ACSL4, SETDB1, METTL14, H3K9me3
Associated microRNA: -
Biological function: circSCYL2 suppresses breast cancer brain metastasis, inhibits cancer cell crossing of the blood-brain barrier, reduces brain metastatic burden, promotes ferroptosis, increases cancer cell death, and decreases tumor proliferation marker Ki67 in vivo.
Molecular mechanism: circSCYL2 competitively binds the m6A reader hnRNPA2B1, blocks hnRNPA2B1 recognition of m6A-modified ACSL4 mRNA and recruitment of SETDB1, reduces H3K9me3 at the ACSL4 promoter, enhances ACSL4 transcription, and promotes ferroptosis to inhibit brain metastasis.
Biological pathway or process:

ferroptosis (promotes); metastasis (inhibits); proliferation (inhibits); migration (inhibits); m6A modification (other); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNA-seq; Bioinformatics Analysis; Transfection; Transwell Assay; Flow Cytometry(Non-apoptosis/cycle); RNA Pull-Down; Western Blot; RIP (RNA Immunoprecipitation); FISH / smFISH; IF (Immunofluorescence); MeRIP / MeRIP-seq; Luciferase Reporter Assay; Co-IP; ChIP / ChIP-seq; Nuclear-Cytoplasmic Fractionation; In Vivo Animal Model; H&E Staining

Clinical significance:

circSCYL2 has potential as a biomarker for predicting the risk of brain metastasis in BC patients and as a therapeutic target for suppressing brain metastasis, but clinical validation remains required.

Description:

circSCYL2 is downregulated in breast cancer cells from brain metastases. Its overexpression suppresses brain metastatic colonization and BBB crossing by promoting ACSL4-dependent ferroptosis. Mechanistically, circSCYL2 binds hnRNPA2B1 and disrupts m6A-dependent hnRNPA2B1/SETDB1-mediated H3K9me3 repression at the ACSL4 promoter, thereby enhancing ACSL4 transcription.

Confidence score:

0.7233

Other information
Title:

circSCYL2 antagonizes hnRNPA2B1-mediated m6A-chromatin crosstalk to promote ferroptosis and inhibit metastasis of breast cancer to brain.

Journal: International journal of biological macromolecules
Published: 2026
PubMed ID: 41407226
Study type:

combined biological and bioinformatics study

Data availability: PRJNA1375426
Code availability: -