circRNA basic information
circBase ID: -
Name: -
Synonym: circRIMS
Host Gene: -
Genomic location(hg19): chr6:73005640-73043538:.
Genomic location(hg38): chr6:72295937-72333835:.
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric adenocarcinoma tissues / GC tumor tissues

Cell lines:

SNU-216; HGC-27; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: hsa-miR-148a-5p, hsa-miR-218-5p
Biological function: promotes gastric cancer cell migration, invasion and metastasis
Molecular mechanism: acts as a microRNA sponge for hsa-miR-148a-5p and hsa-miR-218-5p
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

circRNA-seq; Bioinformatics Analysis; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Transfection; RNA Pull-Down; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; Transwell Assay; Wound Healing Assay; CCK8; In Vivo Animal Model; Survival Analysis; ROC Analysis

Clinical significance:

potential early biomarker for predicting invasive metastasis in GC

Description:

circRIMS is up-regulated in metastasis-prone gastric cancer tissues (higher in T3N3M0 than T3N1M0) and promotes GC cell migration, invasion, and in vivo metastatic burden. Mechanistically, it functions as a miRNA sponge for hsa-miR-148a-5p and hsa-miR-218-5p, and miRNA mimics can rescue/reverse the pro-metastatic phenotype. It is proposed as a potential early biomarker for predicting invasive metastasis in GC.

Confidence score:

0.8754

Other information
Title:

CircRNA CircRIMS Acts as a MicroRNA Sponge to Promote Gastric Cancer Metastasis.

Journal: ACS omega
Published: 2020
PubMed ID: 32954174
Study type:

combined biological and clinical study

Data availability: Supporting Information Available: Whole sequence of circRIMS, primers used in this study, and list of microRNAs (PDF) (XLSX)
Code availability: -