circRNA basic information
circBase ID: -
Name: hsa_circ_SLC30A7
Synonym: circRNA_100290
Host Gene: SLC30A7
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; matched normal gastric epithelial tissues

Cell lines:

AGS; BGC-823; SGC-7901; HGC-27; GES-1; HEK 293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ITGA11, EIF4A3
Associated microRNA: miR-29b-3p
Biological function: Promotes GC cell proliferation, migration, invasion, and EMT; induces cell cycle progression (knockdown causes G0/G1 arrest).
Molecular mechanism: Acts as a miRNA sponge for miR-29b-3p to increase ITGA11 expression, thereby promoting EMT; EIF4A3 binds flanking regions and inhibits circRNA_100290 formation.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Luciferase Reporter Assay; Western Blot; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Wound Healing Assay; Transwell Assay; Bioinformatics Analysis

Clinical significance:

High circRNA_100290 expression was closely related to Borrmann’s type, lymph node metastasis and tumour-node-metastasis stage; proposed as a biomarker/target.

Description:

circRNA_100290 is upregulated in gastric cancer tissues and cell lines and promotes proliferation, migration, invasion, cell-cycle progression, and EMT. It acts as a ceRNA by sponging miR-29b-3p to upregulate ITGA11, while EIF4A3 binds flanking regions to inhibit circRNA_100290 formation.

Confidence score:

0.705

Other information
Title:

CircRNA_100290 promotes GC cell proliferation and invasion via the miR-29b-3p/ITGA11 axis and is regulated by EIF4A3.

Journal: Cancer cell international
Published: 2021
PubMed ID: 34182990
Study type:

combined biological and clinical study

Data availability: GSE62254; TCGA
Code availability: -