circRNA basic information
circBase ID: hsa_circ_0001649
Name: hsa_circ_SHPRH
Synonym: circSHPRH
Host Gene: SHPRH
Genomic location(hg19): chr6:146209155-146216113:-
Genomic location(hg38): chr6:145888019-145894977:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer / BCa
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BCa tissues; paired paracancerous tissues / paired normal tissues

Cell lines:

5637; T24; J82; EJ; UM-UC-3; SV-HUC-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: BARX2, Wnt/beta-catenin signaling pathway
Associated microRNA: miR-942
Biological function: inhibits proliferation; inhibits migration; inhibits invasion; represses tumor growth
Molecular mechanism: circSHPRH acts as a miR-942 sponge to upregulate BARX2 and inhibit Wnt/beta-catenin signaling
Biological pathway or process:

Wnt/beta-catenin (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

a low circSHPRH level was positively correlated with a high grade, a high pathological stage, lymphatic metastasis and an unfavorable prognosis for BCa patients

Description:

circSHPRH (hsa_circ_0001649) is down-regulated in bladder cancer and acts as a tumor suppressor. It sponges miR-942 to increase BARX2 expression, thereby inhibiting Wnt/beta-catenin signaling and reducing proliferation, migration, invasion, and in vivo tumor growth. Low circSHPRH expression is associated with advanced clinicopathological features and worse survival.

Confidence score:

0.8285

Other information
Title:

Circular RNA circSHPRH inhibits the malignant behaviors of bladder cancer by regulating the miR-942/BARX2 pathway.

Journal: Aging
Published: 2022
PubMed ID: 35200157
Study type:

combined biological and clinical study

Data availability: GSE97239; TCGA
Code availability: -