circRNA basic information
circBase ID: hsa_circ_0089823
Name: hsa_circ_ARSE
Synonym: Circ_0089823
Host Gene: ARSE
Genomic location(hg19): chrX:2871183-2873578:-
Genomic location(hg38): chrX:2953142-2955537:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissue; adjacent non-cancer tissue

Cell lines:

HBE; PLA-801D; NCI-H1299; HCC827; NCI-H1437; NCI-H446; A549; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX4, AGO2
Associated microRNA: miR-507, miR-557, miR-579-3p, miR-1287-5p
Biological function: Promotes NSCLC cell proliferation and xenograft growth; accelerates cell cycle progression; inhibits apoptosis.
Molecular mechanism: Acts as a miRNA sponge for miR-507/miR-557/miR-579-3p/miR-1287-5p to up-regulate SOX4.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Western Blot; In Vivo Animal Model; IF (Immunofluorescence); TUNEL; ROC Analysis; Clinical Sample Validation

Clinical significance:

circ_0089823 level differentiates NSCLC tissues from adjacent non-cancer tissues (AUC 0.9537) and is associated with gender, tumor size, pathological type, TNM stage and smoking history.

Description:

circ_0089823 is up-regulated in NSCLC tissues and cell lines and primarily localizes to the cytoplasm. It promotes NSCLC proliferation and tumor growth while inhibiting apoptosis, mainly by sponging miR-507/miR-557/miR-579-3p/miR-1287-5p to up-regulate SOX4.

Confidence score:

0.8432

Other information
Title:

Circ_0089823 reinforces malignant behaviors of non-small cell lung cancer by acting as a sponge for microRNAs targeting SOX4.

Journal: Neoplasia (New York, N.Y.)
Published: 2021
PubMed ID: 34311177
Study type:

combined biological and clinical study

Data availability: doi:10.1016/j.neo.2021.06.011
Code availability: -