circRNA basic information
circBase ID: -
Name: hsa_circ_PDIA4
Synonym: circPDIA4
Host Gene: PDIA4
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent healthy tissues; tumor tissues

Cell lines:

HCT116; HT29; SW480; RKO; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: AGO2, SP1, PDIA4 promoter
Associated microRNA: miR-9-5p
Biological function: promotes proliferation, migration, invasion, and in vivo tumor growth in colorectal cancer
Molecular mechanism: Acts as a miRNA sponge for miR-9-5p to upregulate SP1; SP1 binds PDIA4 promoter to induce circPDIA4 transcription, forming a positive feedback loop
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; RNase R Treatment; Actinomycin D / DRB Stability Assay; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; ChIP / ChIP-seq; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

suggested as a promising biomarker for CRC patient treatment

Description:

circPDIA4 is up-regulated in colorectal cancer tissues and cell lines and promotes CRC proliferation, migration, invasion, and xenograft tumor growth. Mechanistically, it mainly localizes to the cytoplasm and functions as a ceRNA by sponging miR-9-5p to de-repress SP1, while SP1 transcriptionally enhances PDIA4/circPDIA4, forming a positive feedback loop that aggravates CRC progression.

Confidence score:

0.8455

Other information
Title:

Amplifying colorectal cancer progression: impact of a PDIA4/SP1 positive feedback loop by circPDIA4 sponging miR-9-5p.

Journal: Cancer biology & medicine
Published: 2024
PubMed ID: 38907517
Study type:

combined biological and clinical study

Data availability: The data generated in this study are available upon request from the corresponding author.
Code availability: -