circRNA basic information
circBase ID: -
Name: hsa_circ_PTPRK
Synonym: circPTPRK
Host Gene: PTPRK
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

MHCC-97H; HepG2; HUVECs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PLA2G4E
Associated microRNA: -
Biological function: Promotes HUVEC proliferation, migration, and tube formation (angiogenesis) in the post-RFA (heat-stimulated) context of HCC via exosomes.
Molecular mechanism: Exosomal circPTPRK upregulates PLA2G4E in recipient HUVECs; PLA2G4E overexpression rescues the inhibitory effects caused by circPTPRK knockdown.
Biological pathway or process:

angiogenesis (promotes); proliferation (promotes); migration (promotes); VEGF/VEGFR (other); TGF-beta/SMAD (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Sanger Sequencing; Transfection; CCK8; Transwell Assay; Wound Healing Assay; Tube Formation Assay; Bioinformatics Analysis

Clinical significance:

-

Description:

circPTPRK is up-regulated in heat-stimulated HCC cell-derived exosomes and increases in HUVECs after exosome uptake. Exosomal circPTPRK promotes HUVEC proliferation, migration, and tube formation, at least partly by upregulating the downstream target PLA2G4E.

Confidence score:

0.5979

Other information
Title:

Exosomal circPTPRK promotes angiogenesis after radiofrequency ablation in hepatocellular carcinoma.

Journal: Experimental biology and medicine (Maywood, N.J.)
Published: 2024
PubMed ID: 39469202
Study type:

biological research

Data availability: https://www.ebm-journal.org/articles/10.3389/ebm.2024.10084/full#supplementary-material
Code availability: -