circRNA basic information
circBase ID: hsa_circ_0049396
Name: hsa_circ_LDLR
Synonym: -
Host Gene: LDLR
Genomic location(hg19): chr19:11227534-11238761:+
Genomic location(hg38): chr19:11116858-11128085:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NPC tissues; adjacent normal tissues

Cell lines:

c666-1; NPC/HK1; NP69

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: EIF4A3, MST1, LATS1, YAP1
Associated microRNA: -
Biological function: hsa_circ_0049396 attenuates NPC tumorigenesis by suppressing proliferation, migration, invasion, and tumor growth in vivo.
Molecular mechanism: EIF4A3 binds to the flanking regions of hsa_circ_0049396 and enhances its expression; hsa_circ_0049396 suppresses activation of the Hippo-YAP pathway.
Biological pathway or process:

Hippo/YAP (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; EdU Staining; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; Bioinformatics Analysis; Western Blot; RIP (RNA Immunoprecipitation)

Clinical significance:

low expression indicated poor prognosis; may serve as a potential diagnostic biomarker or drug target in NPC

Description:

hsa_circ_0049396 is downregulated in nasopharyngeal carcinoma tissues and cells, and low expression is associated with poor prognosis. EIF4A3 enhances hsa_circ_0049396 expression by binding its flanking regions, while hsa_circ_0049396 overexpression suppresses NPC proliferation, migration, invasion, and xenograft tumor growth through inhibition of the Hippo-YAP pathway. The study suggests hsa_circ_0049396 as a potential diagnostic biomarker or drug target for NPC.

Confidence score:

0.7661

Other information
Title:

EIF4A3-Induced Upregulation of hsa_circ_0049396 Attenuates the Tumorigenesis of Nasopharyngeal Carcinoma by Regulating the Hippo-YAP Pathway.

Journal: DNA and cell biology
Published: 2024
PubMed ID: 39133108
Study type:

combined biological and clinical study

Data availability: The data in the current study can be obtained from the corresponding author upon reasonable request.
Code availability: -