circRNA basic information
circBase ID: hsa_circ_0091579
Name: hsa_circ_GPC3
Synonym: -
Host Gene: GPC3
Genomic location(hg19): chrX:132795757-132888203:-
Genomic location(hg38): chrX:133661729-133754176:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tumor specimens; adjacent (ANT) healthy specimens; xenograft tumor tissues

Cell lines:

THLE-2; HCCLM3; MHCC97H; Huh-7

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TRIM27
Associated microRNA: miR-136-5p
Biological function: promotes proliferation, migration, invasion, cell cycle progression and EMT; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ_0091579 sponges miR-136-5p to up-regulate TRIM27
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); cell cycle (promotes); apoptosis (inhibits); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; divergent primers PCR; Nuclear-Cytoplasmic Fractionation; Northern Blot; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

HCC patients with high circ_0091579 expression displayed low survival rate; associated with advanced TNM stage and large tumor size; potential prognostic biomarker

Description:

Circ_0091579 is up-regulated in hepatocellular carcinoma and is associated with poorer survival. Functionally, it promotes HCC cell proliferation, migration/invasion, cell-cycle progression and EMT while inhibiting apoptosis, and it enhances xenograft tumor growth. Mechanistically, circ_0091579 mainly localizes to the cytoplasm and acts as a ceRNA sponge for miR-136-5p to up-regulate TRIM27.

Confidence score:

0.8498

Other information
Title:

Circ_0091579 exerts an oncogenic role in hepatocellular carcinoma via mediating miR-136-5p/TRIM27.

Journal: Biomedical journal
Published: 2022
PubMed ID: 34974169
Study type:

combined biological and clinical study

Data availability: Supplementary data to this article can be found online at https://doi.org/10.1016/j.bj.2021.12.009.
Code availability: -