circRNA basic information
circBase ID: hsa_circ_0020093
Name: hsa_circ_ATRNL1
Synonym: circATRNL1
Host Gene: ATRNL1
Genomic location(hg19): chr10:116879948-116889297:+
Genomic location(hg38): chr10:115120184-115129535:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008170
MONDO name: ovarian cancer
Disease details: ovarian cancer
Disease DO ID:
2394
Disease MeSH ID:
D010051
Disease NCIt ID:
C7431
Disease ICD11 ID:
685124533
Disease OMIM ID:
167000
Species: Human
Species details: Homo sapiens
Tissue specimen:

ovarian cancer tissues; adjacent noncancer ovarian tissues; tumor tissues

Cell lines:

A2780; SKOV3; CAOV-3; SNU119; IOSE80; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: Smad4, AKT
Associated microRNA: miR-378
Biological function: promotes apoptosis; inhibits proliferation, migration, invasion, angiogenesis, and abdominal metastasis in ovarian cancer
Molecular mechanism: acts as a miR-378 sponge to disinhibit Smad4 and modulate AKT phosphorylation/signaling
Biological pathway or process:

ceRNA regulation (promotes); AKT signaling (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits); angiogenesis (inhibits); apoptosis (promotes); metastasis (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Tube Formation Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation; Survival Analysis

Clinical significance:

Low circATRNL1 level is correlated with poor survival rate; circATRNL1 may serve as a biomarker for ovarian cancer

Description:

circATRNL1 is down-regulated in ovarian cancer and acts as a tumor suppressor. It sponges miR-378 to relieve repression of Smad4, thereby inhibiting AKT signaling, reducing proliferation/migration/invasion/angiogenesis and metastasis, and higher circATRNL1 predicts better survival.

Confidence score:

0.7829

Other information
Title:

CircATRNL1 activates Smad4 signaling to inhibit angiogenesis and ovarian cancer metastasis via miR-378.

Journal: Molecular oncology
Published: 2021
PubMed ID: 33372356
Study type:

combined biological and clinical study

Data availability: -
Code availability: -