circRNA basic information
circBase ID: hsa_circ_0000268
Name: hsa_circ_ZRANB1
Synonym: -
Host Gene: ZRANB1
Genomic location(hg19): chr10:126631025-126631876:+
Genomic location(hg38): chr10:124942456-124943307:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005041
MONDO name: glaucoma
Disease details: glaucoma
Disease DO ID:
1686
Disease MeSH ID:
D005901
Disease NCIt ID:
C26782
Disease ICD11 ID:
499924848
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

rat retinas; aqueous humor

Cell lines:

rMC-1

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: RUNX2
Associated microRNA: miR-217
Biological function: Promotes retinal reactive gliosis and glial cell activation and contributes to RGC degeneration; cZRANB1 knockdown facilitates RGC survival and reduces Müller cell proliferation/viability.
Molecular mechanism: Acts as a miRNA sponge for miR-217, relieving miR-217 repression of RUNX2 to regulate Müller cell function.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); apoptosis (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Transfection; MTT; IF (Immunofluorescence); In Vivo Animal Model; Flow Cytometry(Non-apoptosis/cycle); Luciferase Reporter Assay; RNA Pull-Down; Western Blot

Clinical significance:

cZRANB1 was significantly upregulated in the aqueous humor from the patients with primary open-angle glaucoma.

Description:

cZRANB1 is up-regulated in glaucoma-associated retinal neurodegeneration and contributes to reactive gliosis and glial activation. Silencing cZRANB1 reduces Müller cell proliferation/activation and indirectly protects RGCs, mainly via a ceRNA mechanism involving miR-217 and RUNX2.

Confidence score:

0.7659

Other information
Title:

Targeting circular RNA-ZRANB1 for therapeutic intervention in retinal neurodegeneration.

Journal: Cell death & disease
Published: 2018
PubMed ID: 29748605
Study type:

combined biological and clinical study

Data availability: Supplementary Information accompanies this paper at (10.1038/s41419-018-0597-7).
Code availability: -